The CZ Biohub MERFISH mouse dataset is a comparative study of MERFISH spatial transcriptomics in mouse liver and kidney with bulk and single-cell RNA sequencing data from Tabula Muris Senis. The work is in collaboration with Vizgen, Inc. and the University of California, San Francisco. See the bioRxiv preprint here.
In this web portal, you can access links to the raw data, processed data, and GitHub code repository. In addition, you can navigate to other pages in the portal to interactively look at some raw images and plots of MERFISH data.